Cottage Cheese Protein Pasta Bake

Featured in: Dinner Fix

This hearty dish combines al dente pasta with a robust tomato-beef sauce, creamy cottage cheese, and generous mozzarella, all baked until golden and bubbly. Begin by cooking your preferred pasta to just al dente. In parallel, brown lean ground beef with aromatics like onion and garlic, then simmer it in a rich tomato base seasoned with Italian herbs.

Next, gently combine the cooked pasta with the savory beef sauce, smooth cottage cheese, and a portion of the mozzarella. Transfer this mixture into a baking dish, topping with the remaining mozzarella. Bake until the cheese is beautifully melted and the edges are golden. A brief rest after baking ensures perfect serving consistency, allowing flavors to meld. Garnish with fresh herbs for a vibrant finish.

Updated on Sat, 31 Jan 2026 13:20:00 GMT
Freshly baked Cottage Cheese Protein Pasta Bake with ground beef, golden mozzarella, and fresh parsley garnish on a table. Save
Freshly baked Cottage Cheese Protein Pasta Bake with ground beef, golden mozzarella, and fresh parsley garnish on a table. | nachohaha.com

The winter my basement gym became my second home, I started experimenting with high-protein comfort food. This pasta bake happened on a Tuesday when I wanted something that felt indulgent but would actually fuel my recovery. The cottage cheese was a happy accident, I'd run out of ricotta and needed something creamy that packed more protein per bite. Now it's the most requested dinner at our monthly friend dinners.

Last month my neighbor Sarah caught the smell wafting through our shared wall and knocked on my door with fork in hand. She said she'd been trying to find a pasta bake that didnt leave her feeling heavy and sluggish afterward. We ate standing up in my kitchen while she listed all the workout classes she wanted to try, which felt like exactly the right energy for this dish.

Ingredients

  • 12 ounces penne or rigatoni: Pick pasta with ridges because they hold onto the thick meat sauce better than smooth varieties
  • 1 pound lean ground beef: The 85% lean ratio gives you enough fat for flavor without excessive grease to drain later
  • 1 cup low-fat cottage cheese: This is the secret protein boost that melts beautifully into the sauce without separating
  • ½ cup grated Parmesan cheese: Adds a sharp salty kick that cuts through the richness of the beef and dairy
  • 1 cup shredded part-skim mozzarella: Divided use lets you get flavor melted throughout and that golden bubbly top
  • 1 medium yellow onion: Finely chopped so it almost disappears into the sauce instead of staying in distinct pieces
  • 2 cloves garlic: Minced fresh rather than powdered makes a noticeable difference in the finished dish
  • 1 can crushed tomatoes: The chunky texture creates more interest than perfectly smooth tomato sauce
  • 1 can tomato paste: Concentrated tomato flavor that makes the sauce taste like it simmered for hours
  • ½ cup beef broth or water: Thins the tomato paste just enough while adding another layer of savory depth
  • 1 tablespoon olive oil: The foundation for sautéing your aromatics and prevents sticking
  • 1 teaspoon dried oregano: Earthy and slightly bitter which balances the sweet tomatoes
  • 1 teaspoon dried basil: Sweet and mild, pairs perfectly with the oregano for classic Italian flavor
  • ½ teaspoon red pepper flakes: Optional but recommended for a gentle warmth that builds as you eat
  • Salt and black pepper: Season generously but taste as you go since Parmesan adds saltiness too
  • Fresh parsley or basil: The finishing touch that adds bright color and fresh flavor against the rich bake

Instructions

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Get your oven ready first:
Preheat to 375°F and grease a 9×13-inch baking dish so nothing sticks to the bottom during that long bake time
Cook the pasta smart:
Boil salted water and cook pasta 1 to 2 minutes less than the package directs since it will finish cooking in the oven
Build your flavor foundation:
Heat olive oil in a large skillet and sauté onion until translucent about 4 minutes then add garlic for just 30 seconds until fragrant
Brown the beef properly:
Add ground beef breaking it into small pieces and cook until no longer pink about 8 minutes draining any excess fat
Create the sauce:
Stir in tomato paste to coat the beef then add crushed tomatoes broth oregano basil red pepper flakes salt and pepper simmering for 10 minutes
Bring it all together:
In a large bowl combine the drained pasta beef sauce cottage cheese Parmesan and half the mozzarella tossing gently until evenly mixed
Assemble for baking:
Spread the mixture into your prepared baking dish and sprinkle the remaining mozzarella over the top
Bake until golden:
Cook for 20 to 25 minutes until the cheese is melted bubbly and starting to turn golden at the edges
Let it rest:
Remove from oven and wait 5 minutes before serving so the sauce sets slightly and makes serving easier
Finish with freshness:
Garnish with chopped fresh parsley or basil right before bringing it to the table
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Quickly cook hard boiled, poached, or scrambled eggs and omelets for easy breakfasts and meal prep.
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Golden bubbling Cottage Cheese Protein Pasta Bake with ground beef, creamy cottage cheese, and rich tomato sauce in a dish. Save
Golden bubbling Cottage Cheese Protein Pasta Bake with ground beef, creamy cottage cheese, and rich tomato sauce in a dish. | nachohaha.com

This recipe became my go-to meal prep staple because it scales so beautifully and holds up in the freezer. Something about cutting into that golden cheese topping after a long day makes even a Tuesday evening feel special.

Make It Your Own

Ground turkey or chicken work perfectly if you want something lighter though you might need an extra pinch of salt to compensate for the milder flavor. I've added fresh spinach in the last few minutes of sauce simmering when I need to sneak in greens for picky eaters.

Timing Everything Right

The key is starting the sauce while the pasta water comes to a boil so both components are ready around the same time. If your sauce finishes before the pasta just turn it to the lowest setting and cover it to stay warm without reducing further.

Serving Suggestions

A crisp green salad with vinaigrette cuts through the richness nicely and provides textural contrast. For extra protein pair it with a simple roasted chicken or keep it vegetarian with a side of garlic bread.

  • Let it rest the full 5 minutes or you'll lose that beautiful layered structure when you scoop
  • The bake continues cooking slightly from residual heat so pulling it a minute early prevents overcooking
  • Room temperature cottage cheese blends better than cold so take it out while you prep other ingredients
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Spoon serving Cottage Cheese Protein Pasta Bake with ground beef from a 9x13-inch baking dish, paired with fresh basil leaves. Save
Spoon serving Cottage Cheese Protein Pasta Bake with ground beef from a 9x13-inch baking dish, paired with fresh basil leaves. | nachohaha.com

This is the kind of dinner that makes people ask for seconds before they've even finished their first helping. Hope it becomes a regular in your rotation too.

Recipe FAQ

Can I use different pasta shapes for this bake?

Yes, while penne or rigatoni are excellent choices, most sturdy pasta shapes such as ziti or rotini will work well. Just ensure it's cooked to just al dente before mixing.

What are good substitutes for ground beef?

For a lighter version, lean ground turkey or chicken are fantastic substitutes. Plant-based crumbles can also be used for a vegetarian alternative, maintaining a savory base.

Can I add more vegetables to this dish?

Absolutely! Sautéed bell peppers, mushrooms, or fresh spinach can be incorporated with the ground beef sauce. This adds extra nutrients, color, and texture to the finished bake.

How should I store and reheat leftovers?

Store any remaining portions in an airtight container in the refrigerator for up to 3 days. Reheat gently in the oven or microwave until thoroughly warm.

Is it possible to prepare this dish in advance?

Yes, you can fully assemble the bake and refrigerate it overnight before baking. This makes it a convenient option for meal prepping or busy weeknights, ready to pop in the oven.

Are there dairy-free options for the cheeses?

While the various cheeses are central to this dish's creamy texture and flavor, you can explore dairy-free alternatives for cottage cheese, Parmesan, and mozzarella. Be aware that the texture and melt may vary.

Cottage Cheese Protein Pasta Bake

Pasta, savory ground beef, creamy cottage cheese, and melty mozzarella baked to golden perfection. A comforting, high-protein meal.

Prep duration
20 min
Time to cook
45 min
Complete duration
65 min
Created by Carlos Vega

Type Dinner Fix

Complexity Medium

Heritage American-Italian

Output 6 Portions

Dietary requirements None specified

Components

Pasta

01 12 ounces penne or rigatoni

Meat & Dairy

01 1 pound lean ground beef (85% lean or higher)
02 1 cup low-fat cottage cheese
03 ½ cup grated Parmesan cheese
04 1 cup shredded part-skim mozzarella cheese, divided

Vegetables & Aromatics

01 1 medium yellow onion, finely chopped
02 2 cloves garlic, minced

Sauce

01 1 can (14 ounces) crushed tomatoes
02 1 can (6 ounces) tomato paste
03 ½ cup beef broth or water

Pantry & Spices

01 1 tablespoon olive oil
02 1 teaspoon dried oregano
03 1 teaspoon dried basil
04 ½ teaspoon red pepper flakes
05 Salt and freshly ground black pepper, to taste

Garnish

01 Fresh parsley or basil leaves

Directions

Phase 01

Preheat oven and prepare baking dish: Preheat oven to 375°F. Lightly grease a 9×13-inch baking dish with cooking spray or oil.

Phase 02

Cook pasta to al dente: Bring a large pot of salted water to a boil. Cook pasta until just al dente, about 1–2 minutes less than package directions. Drain and set aside.

Phase 03

Sauté aromatics: Heat olive oil in a large skillet over medium heat. Add onion and sauté until translucent, 3–4 minutes. Stir in garlic and cook for 30 seconds until fragrant.

Phase 04

Brown ground beef: Add ground beef, breaking it into small pieces. Cook until browned and no longer pink, 6–8 minutes. Drain excess fat if desired.

Phase 05

Build tomato sauce: Stir in tomato paste to coat the beef. Add crushed tomatoes and beef broth. Mix in oregano, basil, red pepper flakes, salt, and pepper. Simmer on low for 8–10 minutes, stirring occasionally.

Phase 06

Combine pasta with sauce and cheeses: In a large bowl, combine drained pasta, beef-tomato sauce, cottage cheese, Parmesan, and half (½ cup) of the mozzarella. Toss gently until evenly mixed.

Phase 07

Assemble pasta bake: Spread the mixture into the prepared baking dish. Sprinkle the remaining ½ cup mozzarella over the top.

Phase 08

Bake until golden and bubbly: Bake for 20–25 minutes, or until the cheese is melted, bubbly, and golden at the edges.

Phase 09

Rest and garnish: Remove from oven and let rest for 5 minutes. Garnish with chopped parsley or basil before serving.

Tools needed

  • Large pot
  • Large skillet
  • Mixing bowl
  • 9×13-inch baking dish
  • Wooden spoon or spatula
  • Colander

Allergy details

Review each component for potential allergens and speak with a healthcare provider if you're concerned about specific ingredients.
  • Contains wheat (pasta), milk (cottage cheese, Parmesan, mozzarella). May contain soy (check cheese and pasta labels). Always check ingredient labels for hidden allergens.

Nutrient breakdown (per portion)

These values are estimates only and shouldn't replace professional medical guidance.
  • Energy: 575
  • Fats: 20 g
  • Carbohydrates: 56 g
  • Proteins: 41 g